Basic Information
Locus ID:
gene-QYE76_005409
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
EBF1
Description:
Leucine-rich repeat - CC (cysteine-containing) subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 179756467 | 179762507 | + | gene-QYE76_005409 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 96,810.90 Da | 53.16 | 71.47 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 220 | 311 | 3.4E-10 | IPR005162 |
| Pfam | PF03078 | ATHILA ORF-1 family | 539 | 697 | 4.5E-7 | IPR004312 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 419 | 513 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 495 | 511 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 468 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 831 | 858 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 104 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051192320.1 | uncharacterized protein LOC127305832 isoform X1 [Lolium perenne] | 0 |
| TrEMBL | A0A2T2PTT2 | Retrotrans_gag domain-containing protein OS=Bradyrhizobium sp. MOS002 OX=2133947 GN=C7G41_36765 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 272 | gene-QYE76_000070, gene-QYE76_000854, gene-QYE76_001188 ... |