Basic Information
Locus ID:
gene-QYE76_005196
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
CAF1 family ribonuclease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 172689659 | 172690497 | + | gene-QYE76_005196 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 27,137.41 Da | 31.65 | 88.82 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04857 | CAF1 family ribonuclease | 130 | 210 | 1.3E-5 | IPR006941 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 14 | 235 | 2.58E-73 | IPR012337 |
| Gene3D | G3DSA:3.30.420.10 | - | 71 | 235 | 8.2E-57 | IPR036397 |
| Gene3D | G3DSA:3.30.420.10 | - | 2 | 70 | 4.3E-19 | IPR036397 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32070.1 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein. | 0 |
| RefSeq | XP_051187800.1 | probable CCR4-associated factor 1 homolog 7 [Lolium perenne] | 0 |
| Q9SKZ2 | Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2 | 0 | |
| TrEMBL | F2DZF5 | poly(A)-specific ribonuclease OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology