Basic Information
Locus ID:
gene-QYE76_005086
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ribosomal protein S20
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 168811699 | 168812891 | - | gene-QYE76_005086 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.80 | 10,472.17 Da | 32.97 | 92.00 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00338 | Ribosomal protein S10p/S20e | 7 | 91 | 1.9E-23 | IPR027486 |
| SUPERFAMILY | SSF54999 | Ribosomal protein S10 | 7 | 92 | 1.06E-24 | IPR036838 |
| Gene3D | G3DSA:3.30.70.600 | Ribosomal protein S10 domain | 6 | 94 | 7.7E-37 | IPR036838 |
| SMART | SM01403 | Ribosomal_S10_2 | 11 | 91 | 5.3E-25 | IPR027486 |
| TIGRFAM | TIGR01046 | uS10_euk_arch: ribosomal protein uS10 | 9 | 92 | 4.4E-33 | IPR005729 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 30 | 45 | 6.4E-9 | IPR001848 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 52 | 66 | 6.4E-9 | IPR001848 |
| Hamap | MF_00508 | 30S ribosomal protein S10 [rpsJ]. | 1 | 92 | 11.86007 | IPR001848 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47370.1 | Ribosomal protein S10p/S20e family protein. | 0 |
| RefSeq | XP_044354449.1 | 40S ribosomal protein S20-like, partial [Triticum aestivum] | 0 |
| P35686 | Small ribosomal subunit protein uS10 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS20 PE=2 SV=2 | 0 | |
| TrEMBL | I1H1V2 | Ribosomal_S10 domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100838410 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology