Basic Information
Locus ID:
gene-QYE76_004924
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 162753494 | 162754564 | + | gene-QYE76_004924 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 37,286.83 Da | 47.70 | 81.29 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 145 | 188 | 5.76644E-19 | - |
| Pfam | PF13639 | Ring finger domain | 145 | 188 | 1.9E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 121 | 192 | 5.18E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 103 | 193 | 3.0E-21 | IPR013083 |
| SMART | SM00744 | ringv_2 | 145 | 188 | 0.0047 | IPR011016 |
| SMART | SM00184 | ring_2 | 146 | 187 | 1.2E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 146 | 188 | 13.389211 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 356 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_047049637.1 | RING-H2 finger protein ATL46-like [Lolium rigidum] | 0 |
| Q9FL07 | RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453KQV9 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology