Basic Information
Locus ID:
gene-QYE76_004629
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Anaphase-promoting complex subunit 4 WD40 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 153510249 | 153513977 | - | gene-QYE76_004629 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 52,480.81 Da | 54.16 | 74.41 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 160 | 449 | 1.17019E-43 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 326 | 364 | 0.006 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 194 | 252 | 3.6E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 414 | 449 | 1.9E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 275 | 310 | 5.6E-6 | IPR001680 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 146 | 451 | 1.33E-54 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 101 | 452 | 2.2E-115 | IPR015943 |
| SMART | SM00320 | WD40_4 | 410 | 449 | 9.2E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 367 | 407 | 330.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 271 | 310 | 1.3E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 187 | 226 | 0.009 | IPR001680 |
| SMART | SM00320 | WD40_4 | 322 | 364 | 0.0028 | IPR001680 |
| SMART | SM00320 | WD40_4 | 229 | 267 | 1.4 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 417 | 450 | 11.260138 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 417 | 450 | 13.582925 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 278 | 310 | 10.732868 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 194 | 235 | 10.074014 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 278 | 319 | 12.947979 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 436 | 450 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33260.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.2) | 0 |
| RefSeq | XP_047050930.1 | cell division cycle 20.2, cofactor of APC complex-like [Lolium rigidum] | 0 |
| Q9S7I8 | Cell division cycle 20.2, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7QEV7 | ANAPC4_WD40 domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology