Basic Information
Locus ID:
gene-QYE76_004140
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 136846217 | 136847308 | + | gene-QYE76_004140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 40,360.59 Da | 43.44 | 83.83 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 24 | 152 | 3.70243E-19 | IPR002083 |
| Pfam | PF00917 | MATH domain | 43 | 148 | 1.8E-4 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 191 | 294 | 1.4E-25 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 22 | 153 | 1.8E-22 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 173 | 293 | 1.57E-28 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 297 | 363 | 2.4E-15 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 170 | 296 | 8.5E-32 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 21 | 154 | 5.1E-18 | IPR008974 |
| SMART | SM00225 | BTB_4 | 192 | 296 | 2.7E-23 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 22 | 151 | 11.876298 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 192 | 259 | 19.154577 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.1 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_051190367.1 | BTB/POZ and MATH domain-containing protein 3-like [Lolium perenne] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SQQ7 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_001119, gene-QYE76_001120, gene-QYE76_001122 ... |
| Poaceae | Triticum aestivum | 2 | TraesCS7B02G493300.1.cds1, TraesCS7B02G495700.1.cds1 |