Basic Information
Locus ID:
gene-QYE76_003649
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 120485240 | 120485626 | - | gene-QYE76_003649 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 14,227.39 Da | 66.86 | 77.73 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 73 | 116 | 9.14727E-12 | - |
| Pfam | PF13639 | Ring finger domain | 72 | 116 | 2.3E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 72 | 122 | 1.21E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 49 | 122 | 1.1E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 73 | 115 | 1.0E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 73 | 116 | 12.504031 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051229532.1 | RING-H2 finger protein ATL2-like [Lolium perenne] | 0 |
| TrEMBL | A0A2K2CU55 | RING-type domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_4g44454v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9AG0672420 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_003646, gene-QYE76_003649 |
| Poaceae | Oryza sativa | 1 | LOC_Os12g02210.1 |
| Poaceae | Paspalum vaginatum | 6 | gene-BS78_05G012200, gene-BS78_05G012500 ... |
| Poaceae | Zea mays | 1 | Zm00001eb195250_P001 |