Basic Information
Locus ID:
gene-QYE76_003603
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Alpha mannosidase, middle domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 119361796 | 119373235 | - | gene-QYE76_003603 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 113,661.12 Da | 40.70 | 82.35 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 41 | 318 | 4.91426E-180 | - |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 42 | 354 | 5.7E-92 | IPR000602 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 901 | 1007 | 1.2E-10 | IPR041147 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 359 | 451 | 1.9E-22 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 605 | 819 | 1.6E-43 | IPR011682 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 359 | 457 | 8.17E-29 | IPR028995 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 462 | 1010 | 8.63E-135 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 30 | 357 | 1.0E-107 | IPR011330 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 41 | 322 | 2.4E-121 | IPR027291 |
| Gene3D | G3DSA:2.60.40.1180 | - | 480 | 603 | 3.0E-29 | IPR013780 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 323 | 401 | 1.3E-31 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1360 | - | 887 | 1013 | 3.7E-33 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 402 | 457 | 1.6E-23 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 604 | 867 | 5.3E-92 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 359 | 433 | 2.2E-23 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13980.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_051186127.1 | probable alpha-mannosidase At5g13980 isoform X1 [Lolium perenne] | 0 |
| Q8LPJ3 | Probable alpha-mannosidase At5g13980 OS=Arabidopsis thaliana OX=3702 GN=At5g13980 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2CNF5 | Alpha-mannosidase OS=Brachypodium distachyon OX=15368 GN=100832076 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology