Basic Information
Locus ID:
gene-QYE76_003592
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 118890559 | 118891029 | + | gene-QYE76_003592 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 16,341.30 Da | 49.81 | 69.61 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 91 | 136 | 5.1E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 86 | 142 | 2.12E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 69 | 143 | 7.0E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 93 | 135 | 9.2E-9 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 93 | 136 | 13.182669 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 86 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37230.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_051190286.1 | uncharacterized protein LOC127303615 [Lolium perenne] | 0 |
| TrEMBL | A0A3B6KGW9 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_003592 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G257900 |
| Poaceae | Triticum aestivum | 1 | TraesCS5A02G147800.1.cds1 |