Basic Information
Locus ID:
gene-QYE76_003260
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 106825431 | 106835743 | - | gene-QYE76_003260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 139,470.88 Da | 47.94 | 82.48 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 440 | 537 | 1.77172E-12 | - |
| CDD | cd01647 | RT_LTR | 747 | 886 | 2.2316E-35 | - |
| CDD | cd09274 | RNase_HI_RT_Ty3 | 912 | 1019 | 4.10284E-50 | - |
| Pfam | PF17917 | RNase H-like domain found in reverse transcriptase | 911 | 998 | 2.8E-27 | IPR041373 |
| SUPERFAMILY | SSF50630 | Acid proteases | 437 | 545 | 4.39E-5 | IPR021109 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 707 | 1010 | 5.23E-72 | IPR043502 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 421 | 559 | 8.2E-18 | IPR021109 |
| Gene3D | G3DSA:3.30.70.270 | - | 807 | 820 | 1.1E-20 | IPR043128 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 709 | 806 | 1.1E-20 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 821 | 892 | 8.9E-23 | IPR043128 |
| Gene3D | G3DSA:3.10.20.370 | - | 907 | 969 | 6.1E-6 | - |
| Coils | Coil | Coil | 1106 | 1126 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_019098329.1 | PREDICTED: uncharacterized protein LOC109131614, partial [Camelina sativa] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A6D2KNX8 | RNA-directed DNA polymerase OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS41268 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |