Basic Information
Locus ID:
gene-QYE76_003253
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Belongs to the actin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 106475694 | 106505583 | + | gene-QYE76_003253 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 81,838.39 Da | 48.99 | 83.49 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00012 | NBD_sugar-kinase_HSP70_actin | 352 | 521 | 5.02894E-12 | - |
| Pfam | PF00022 | Actin | 348 | 716 | 4.4E-126 | IPR004000 |
| Pfam | PF00069 | Protein kinase domain | 27 | 291 | 4.3E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 294 | 1.18E-60 | IPR011009 |
| SUPERFAMILY | SSF53067 | Actin-like ATPase domain | 486 | 716 | 1.07E-81 | IPR043129 |
| SUPERFAMILY | SSF53067 | Actin-like ATPase domain | 348 | 493 | 9.39E-52 | IPR043129 |
| Gene3D | G3DSA:3.90.640.10 | Actin; Chain A, domain 4 | 520 | 613 | 3.6E-150 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 116 | 302 | 3.8E-40 | - |
| Gene3D | G3DSA:3.30.420.40 | - | 352 | 711 | 3.6E-150 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 95 | 4.6E-22 | - |
| Gene3D | G3DSA:3.30.420.40 | - | 478 | 680 | 3.6E-150 | - |
| SMART | SM00268 | actin_3 | 349 | 717 | 1.1E-165 | IPR004000 |
| SMART | SM00220 | serkin_6 | 25 | 301 | 2.0E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 25 | 301 | 32.131542 | IPR000719 |
| ProSitePatterns | PS00432 | Actins signature 2. | 698 | 706 | - | IPR004001 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 157 | 169 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 31 | 53 | - | IPR017441 |
| PRINTS | PR00190 | Actin signature | 455 | 468 | 6.0E-40 | IPR004000 |
| PRINTS | PR00190 | Actin signature | 389 | 400 | 6.0E-40 | IPR004000 |
| PRINTS | PR00190 | Actin signature | 401 | 423 | 6.0E-40 | IPR004000 |
| PRINTS | PR00190 | Actin signature | 370 | 379 | 6.0E-40 | IPR004000 |
| PRINTS | PR00190 | Actin signature | 577 | 593 | 6.0E-40 | IPR004000 |
| PRINTS | PR00190 | Actin signature | 480 | 499 | 6.0E-40 | IPR004000 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 338 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G09810.1 | actin 7. Member of Actin gene family.Mutants are defective in germination and root growth. | 0 |
| RefSeq | XP_010534357.1 | PREDICTED: actin-1-like [Tarenaya hassleriana] | 0 |
| P30171 | Actin-97 OS=Solanum tuberosum OX=4113 GN=AC97 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5N6Q8J9 | Actin OS=Mikania micrantha OX=192012 GN=E3N88_03233 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for gene-QYE76_003253.