Basic Information
Locus ID:
gene-QYE76_002996
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Transposase-associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 97230954 | 97234424 | + | gene-QYE76_002996 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 53,904.49 Da | 50.96 | 62.79 | -0.87 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02992 | Transposase family tnp2 | 205 | 245 | 4.1E-12 | IPR004242 |
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 279 | 355 | 6.9E-14 | IPR025312 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 469 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051190813.1 | uncharacterized protein LOC127304151 [Lolium perenne] | 0 |
| TrEMBL | A0A8J5TKY2 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0014g46908 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 30 | gene-QYE76_001210, gene-QYE76_002996, gene-QYE76_004554 ... |