Basic Information
Locus ID:
gene-QYE76_002817
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
rescue of stalled ribosome
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 90540517 | 90543303 | - | gene-QYE76_002817 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 31,114.24 Da | 54.86 | 69.20 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 87 | 130 | 6.0E-7 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 83 | 135 | 6.36E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 69 | 138 | 3.8E-8 | IPR013083 |
| SMART | SM00184 | ring_2 | 88 | 128 | 0.0022 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 88 | 129 | 10.025527 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G62240.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037435732.1 | E3 ubiquitin-protein ligase ZNF598-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6AU06 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.1248s00003.v1.0 |
| Poaceae | Echinochloa crus-galli | 8 | AH03.1700, AH03.3767, BH01.2823, BH03.4047, CH03.2036 ... |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0578090, gene-QOZ80_7BG0609390 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0122090.1.CDS1 |
| Poaceae | Lolium multiflorum | 5 | gene-QYE76_002817, gene-QYE76_039548, gene-QYE76_039634 ... |
| Poaceae | Oryza coarctata | 7 | Oco02G013000, Oco02G013010, Oco02G013020, Oco06G011720 ... |
| Poaceae | Oryza sativa | 9 | LOC_Os01g38690.1, LOC_Os01g38700.1, LOC_Os01g38710.1 ... |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G164300 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0604504 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr10G011450, Chr11G010870, Chr27G015410, Chr27G015420 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G309500 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G156000.1.cds1, TraesCS2B02G181500.1.cds1 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-17826 |