HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QYE76_002549
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: F-box-like
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 81198210 81201697 + gene-QYE76_002549
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.79 67,675.92 Da 44.13 87.10 -0.24
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 11 48 6.1E-8 IPR001810
SUPERFAMILY SSF81383 F-box domain 4 103 2.09E-12 IPR036047
SUPERFAMILY SSF48452 TPR-like 412 501 4.98E-5 IPR011990
Gene3D G3DSA:1.20.1280.50 - 10 56 3.3E-7 -
SMART SM00256 fbox_2 13 56 4.9E-6 IPR001810
ProSiteProfiles PS50181 F-box domain profile. 7 56 9.894885 IPR001810
MobiDBLite mobidb-lite consensus disorder prediction 533 549 - -
MobiDBLite mobidb-lite consensus disorder prediction 515 549 - -
MobiDBLite mobidb-lite consensus disorder prediction 515 532 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K11291 (nuclear autoantigenic sperm protein)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_047049659.1 uncharacterized protein LOC124654708 isoform X1 [Lolium rigidum] 0
TrEMBL A0A3B5ZSH7 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Lolium multiflorum 1 gene-QYE76_002549
Poaceae Puccinellia tenuiflora 1 Pt_Chr0501695
Poaceae Triticum dicoccoides 1 gene_TRIDC1BG019860
Poaceae Triticum aestivum 2 TraesCS1B02G133800.1, TraesCS1D02G115200.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.