Basic Information
Locus ID:
gene-QYE76_002171
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Reverse transcriptase (RNA-dependent DNA polymerase)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 65817976 | 65821165 | - | gene-QYE76_002171 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 40,102.25 Da | 38.87 | 49.61 | -0.99 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 302 | 355 | 1.6E-10 | IPR013103 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 153 | 192 | 1.53E-6 | IPR036875 |
| SMART | SM00343 | c2hcfinal6 | 169 | 185 | 0.0056 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 160 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 160 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 116 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051221414.1 | uncharacterized mitochondrial protein AtMg00820-like [Lolium perenne] | 0 |
| TrEMBL | Q8LN71 | Putative polyprotein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0091N21.45 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G1953 |
| Poaceae | Lolium multiflorum | 59 | gene-QYE76_000611, gene-QYE76_000731, gene-QYE76_000814 ... |