HalophFGD

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Basic Information
Locus ID: gene-QYE76_002125
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 64337035 64337844 + gene-QYE76_002125
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.35 30,971.28 Da 37.59 93.49 -0.11
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 24 62 3.2E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 22 74 5.49E-11 IPR036047
Gene3D G3DSA:1.20.1280.50 - 20 79 4.5E-7 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G58930.2 - 0
RefSeq XP_047052728.1 MEIOTIC F-BOX protein MOF-like [Lolium rigidum] 0
Swiss-Prot Q8GXW6 F-box/LRR-repeat protein At3g58930 OS=Arabidopsis thaliana OX=3702 GN=At3g58930 PE=2 SV=1 0
TrEMBL A0A1D6EA02 F-box domain-containing protein OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d003606 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 1 Sgl51268
Poaceae Echinochloa crus-galli 31 AH01.1527, AH03.669, AH03.670, AH04.1884, AH04.1885 ...
AH09.1070, AH09.1072, AH09.1074, BH03.797, BH03.798, BH04.1916, BH04.1917, BH04.1918, BH07.1796, BH09.1149, BH09.1150, BH09.1151, BH09.1153, BH09.1154, BH09.1155, BH09.1160, BH09.1161, CH03.890, CH03.891, CH04.2256, CH04.2258, CH09.1281, CH09.1282, CH09.1287, CH09.1288, CH09.1291
Poaceae Eleusine coracana subsp. coracana 16 gene-QOZ80_4AG0316660, gene-QOZ80_4AG0316670 ...
gene-QOZ80_4AG0316700, gene-QOZ80_4BG0347870, gene-QOZ80_4BG0347880, gene-QOZ80_4BG0347890, gene-QOZ80_4BG0347900, gene-QOZ80_4BG0347930, gene-QOZ80_4BG0347950, gene-QOZ80_4BG0347960, gene-QOZ80_4BG0347980, gene-QOZ80_5BG0448010, gene-QOZ80_9AG0688290, gene-QOZ80_9AG0688310, gene-QOZ80_9BG0716770, gene-QOZ80_9BG0716790
Poaceae Hordeum vulgare 9 HORVU.MOREX.r3.2HG0113350.1, HORVU.MOREX.r3.2HG0173930.1 ...
HORVU.MOREX.r3.3HG0324350.1, HORVU.MOREX.r3.3HG0329080.1, HORVU.MOREX.r3.4HG0398330.1, HORVU.MOREX.r3.5HG0515150.1.CDS1, HORVU.MOREX.r3.6HG0597680.1, HORVU.MOREX.r3.6HG0624800.1, HORVU.MOREX.r3.6HG0632670.1
Poaceae Lolium multiflorum 36 gene-QYE76_002125, gene-QYE76_020252, gene-QYE76_022723 ...
gene-QYE76_023887, gene-QYE76_026800, gene-QYE76_026837, gene-QYE76_027447, gene-QYE76_033845, gene-QYE76_037310, gene-QYE76_037658, gene-QYE76_041415, gene-QYE76_042114, gene-QYE76_044147, gene-QYE76_044148, gene-QYE76_044157, gene-QYE76_044162, gene-QYE76_044163, gene-QYE76_044165, gene-QYE76_044169, gene-QYE76_044410, gene-QYE76_049203, gene-QYE76_049852, gene-QYE76_049855, gene-QYE76_049903, gene-QYE76_050002, gene-QYE76_050338, gene-QYE76_050339, gene-QYE76_052080, gene-QYE76_053870, gene-QYE76_053871, gene-QYE76_053872, gene-QYE76_064570, gene-QYE76_065702, gene-QYE76_065784, gene-QYE76_068864, gene-QYE76_070044
Poaceae Oryza coarctata 11 Oco03G024970, Oco07G001490, Oco07G006480, Oco07G006490 ...
Oco07G006500, Oco07G007900, Oco07G007930, Oco08G001880, Oco08G006450, Oco08G007830, Oco08G007840
Poaceae Oryza sativa 12 LOC_Os04g12990.1, LOC_Os04g13010.1, LOC_Os04g13040.1 ...
LOC_Os04g35930.1, LOC_Os04g35940.1, LOC_Os04g35970.1, LOC_Os04g35990.1, LOC_Os04g36000.1, LOC_Os04g36010.1, LOC_Os04g36020.1, LOC_Os04g39070.1, LOC_Os04g39080.1
Poaceae Paspalum vaginatum 15 gene-BS78_02G107100, gene-BS78_05G186700, gene-BS78_K330000 ...
gene-BS78_05G199600, gene-BS78_05G199700, gene-BS78_05G199800, gene-BS78_05G199900, gene-BS78_05G200500, gene-BS78_05G200600, gene-BS78_05G232700, gene-BS78_06G104100, gene-BS78_06G104200, gene-BS78_06G104300, gene-BS78_06G104400, gene-BS78_06G104500
Poaceae Puccinellia tenuiflora 17 Pt_Chr0103073, Pt_Chr0103074, Pt_Chr0103075, Pt_Chr0103076 ...
Pt_Chr0104117, Pt_Chr0104119, Pt_Chr0104120, Pt_Chr0104121, Pt_Chr0106209, Pt_Chr0205341, Pt_Chr0303820, Pt_Chr0401094, Pt_Chr0603374, Pt_Chr0604531, Pt_Chr0604666, Pt_Chr0604788, Pt_Chr0702465
Poaceae Sporobolus alterniflorus 7 Chr01G024980, Chr07G015020, Chr23G012520, Chr26G001820 ...
Chr26G007020, Chr28G003530, Chr31G007750
Poaceae Thinopyrum elongatum 7 Tel4E01G435000, Tel5E01G653900, Tel5E01G886800 ...
Tel5E01G887200, Tel6E01G444600, Tel6E01G496200, Tel6E01G642500
Poaceae Triticum dicoccoides 18 gene_TRIDC2AG013410, gene_TRIDC2BG016320 ...
gene_TRIDC2BG047580, gene_TRIDC3AG074830, gene_TRIDC3BG082940, gene_TRIDC3BG086190, gene_TRIDC4AG006730, gene_TRIDC4AG047810, gene_TRIDC4BG044480, gene_TRIDC5AG060400, gene_TRIDC5BG083260, gene_TRIDC6AG035930, gene_TRIDC6AG054100, gene_TRIDC6AG054120, gene_TRIDC6BG023840, gene_TRIDC6BG042610, gene_TRIDC6BG063040, gene_TRIDC6BG063060
Poaceae Triticum aestivum 30 TraesCS1B02G030200.1, TraesCS2B02G325900.1 ...
TraesCS2B02G346600.1, TraesCS2D02G112100.1, TraesCS2D02G307200.1, TraesCS3A02G493200.1, TraesCS3A02G518400.1, TraesCS3A02G529000.1, TraesCS3B02G585800.1, TraesCS3B02G585900.1, TraesCS3B02G598000.1, TraesCS3D02G534300.1, TraesCS4A02G048500.1, TraesCS4A02G048600.1.cds1, TraesCS4A02G316100.1, TraesCS4A02G325200.2, TraesCS4B02G256300.1, TraesCS4D02G364300.1, TraesCS5A02G417200.1, TraesCS5B02G538000.1, TraesCS5D02G425300.1, TraesCS5D02G566400.1, TraesCS6B02G260300.1, TraesCS6B02G297100.1, TraesCS6B02G394600.1, TraesCS6D02G122700.1, TraesCS6D02G215800.1, TraesCS6D02G245100.1, TraesCS6D02G405500.1, TraesCS7A02G139700.1
Poaceae Zea mays 3 Zm00001eb082190_P001, Zm00001eb082200_P001 ...
Zm00001eb082210_P002
Poaceae Zoysia japonica 1 nbis-gene-43120
Poaceae Zoysia macrostachya 1 Zma_g18169
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-17868
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-2945
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-17858
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