Basic Information
Locus ID:
gene-QYE76_002032
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Zinc-ribbon
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 62194492 | 62202898 | + | gene-QYE76_002032 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 101,142.61 Da | 53.61 | 65.58 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16464 | RING-H2_Pirh2 | 781 | 825 | 5.22841E-16 | - |
| Pfam | PF05495 | CHY zinc finger | 651 | 727 | 6.6E-18 | IPR008913 |
| Pfam | PF13639 | Ring finger domain | 781 | 824 | 9.8E-8 | IPR001841 |
| Pfam | PF14599 | Zinc-ribbon | 830 | 886 | 5.8E-24 | IPR039512 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 648 | 716 | 1.96E-16 | IPR037274 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 718 | 775 | 1.06E-18 | IPR037275 |
| SUPERFAMILY | SSF57850 | RING/U-box | 781 | 828 | 1.47E-10 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 852 | 894 | 6.5E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 775 | 826 | 5.2E-11 | IPR013083 |
| SMART | SM00184 | ring_2 | 782 | 824 | 2.0E-7 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 644 | 715 | 24.873308 | IPR008913 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 782 | 825 | 11.884405 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 717 | 781 | 33.595459 | IPR017921 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 386 | 410 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 890 | 910 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 173 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18650.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_051185302.1 | E3 ubiquitin-protein ligase MIEL1-like [Lolium perenne] | 0 |
| Q8VZK0 | E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana OX=3702 GN=MIEL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LGC2 | RING finger and CHY zinc finger domain-containing protein 1 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology