HalophFGD

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Basic Information
Locus ID: gene-QYE76_001376
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 38887376 38890139 + gene-QYE76_001376
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.67 42,703.01 Da 49.41 106.99 -0.08
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 23 76 7.33E-8 IPR036047
SUPERFAMILY SSF52047 RNI-like 176 350 1.33E-10 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 157 368 1.1E-11 IPR032675
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G56420.1 F-box/RNI-like/FBD-like domains-containing protein. 0
RefSeq XP_047050731.1 uncharacterized protein LOC124655951 [Lolium rigidum] 0
Swiss-Prot Q9FM89 F-box/FBD/LRR-repeat protein At5g56420 OS=Arabidopsis thaliana OX=3702 GN=At5g56420 PE=2 SV=1 0
TrEMBL A0A8R7PHB4 F-box domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH03.3902, AH03.3918, AH03.3919, BH03.4191, BH03.4208 ...
CH07.287, Contig181.19
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_2AG0105390, gene-QOZ80_2BG0158860 ...
gene-QOZ80_7BG0611060, gene-QOZ80_8BG0652150
Poaceae Hordeum vulgare 7 HORVU.MOREX.r3.2HG0112990.2, HORVU.MOREX.r3.5HG0531720.1 ...
HORVU.MOREX.r3.2HG0119130.1.CDS1, HORVU.MOREX.r3.5HG0531850.1, HORVU.MOREX.r3.5HG0531930.1, HORVU.MOREX.r3.5HG0531960.1, HORVU.MOREX.r3.5HG0532100.1
Poaceae Lolium multiflorum 13 gene-QYE76_001376, gene-QYE76_035379, gene-QYE76_038799 ...
gene-QYE76_038947, gene-QYE76_039227, gene-QYE76_046284, gene-QYE76_046322, gene-QYE76_060244, gene-QYE76_060246, gene-QYE76_060247, gene-QYE76_060269, gene-QYE76_060272, gene-QYE76_060273
Poaceae Oryza coarctata 6 Oco05G005810, Oco05G005830, Oco06G005980, Oco13G014200 ...
Oco13G014520, Oco14G015090
Poaceae Oryza sativa 2 LOC_Os07g45010.1, LOC_Os07g45050.1
Poaceae Paspalum vaginatum 4 gene-BS78_02G373000, gene-BS78_05G160500, gene-BS78_K157300 ...
gene-BS78_K157400
Poaceae Puccinellia tenuiflora 20 Pt_Chr0105210, Pt_Chr0106234, Pt_Chr0106236, Pt_Chr0106238 ...
Pt_Chr0106239, Pt_Chr0106242, Pt_Chr0106247, Pt_Chr0106249, Pt_Chr0106252, Pt_Chr0106261, Pt_Chr0106266, Pt_Chr0106277, Pt_Chr0106345, Pt_Chr0106378, Pt_Chr0201295, Pt_Chr0301122, Pt_Chr0304904, Pt_Chr0305530, Pt_Ctg00080, Pt_Ctg00084
Poaceae Sporobolus alterniflorus 2 Chr0G002930, Chr27G016370
Poaceae Thinopyrum elongatum 14 Tel2E01G236700, Tel2E01G236800, Tel2E01G288000 ...
Tel2E01G288900, Tel2E01G972700, Tel5E01G818500, Tel5E01G819100, Tel5E01G820600, Tel5E01G820700, Tel5E01G821400, Tel5E01G821600, Tel5E01G822100, Tel5E01G822300, Tel5E01G824800
Poaceae Triticum dicoccoides 16 gene_TRIDC2AG013140, gene_TRIDC2AG017730 ...
gene_TRIDC2AG078710, gene_TRIDC2BG021490, gene_TRIDC4AG052070, gene_TRIDC4AG052220, gene_TRIDC4AG052290, gene_TRIDC5AG025170, gene_TRIDC5BG078190, gene_TRIDC5BG078340, gene_TRIDC5BG078380, gene_TRIDC5BG078500, gene_TRIDC5BG078510, gene_TRIDC5BG078530, gene_TRIDC5BG078540, gene_TRIDC7AG054630
Poaceae Triticum aestivum 32 TraesCS2A02G142200.1, TraesCS2A02G586000.1 ...
TraesCS2B02G128000.1, TraesCS2B02G128200.1, TraesCS2B02G167400.1, TraesCS2B02G597100.1, TraesCS2B02G597200.1, TraesCS2D02G110200.1, TraesCS2D02G110300.1, TraesCS2D02G600600.2, TraesCS4A02G343600.1, TraesCS4A02G344300.1, TraesCS4A02G346700.2, TraesCS4A02G347400.1, TraesCS4A02G348000.1, TraesCS5A02G150600.1, TraesCS5A02G407900.2, TraesCS5B02G412800.1, TraesCS5B02G526100.1, TraesCS5B02G526400.2, TraesCS5B02G527200.1, TraesCS5B02G530600.1, TraesCS5D02G155700.3, TraesCS5D02G417800.1, TraesCS5D02G525800.1, TraesCS5D02G526500.1, TraesCS5D02G526700.1, TraesCS5D02G527300.1, TraesCS5D02G527400.1, TraesCS5D02G529400.1, TraesCS7A02G393200.1, TraesCSU02G062100.2
Poaceae Zoysia japonica 1 nbis-gene-5246
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