halophFGD

Basic Information

Locus ID: gene-QYE76_001346

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: gag-polypeptide of LTR copia-type

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr5	37448633	37451695	+	gene-QYE76_001346

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
10.20	52,618.36 Da	40.39	116.95	0.39

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF14223	gag-polypeptide of LTR copia-type	78	197	2.2E-18	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_051218595.1	uncharacterized protein LOC127335897 [Lolium perenne]	0
TrEMBL	Q2R2J8	Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os11g35570 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	30	gene-QYE76_000020, gene-QYE76_000848, gene-QYE76_001346 ... gene-QYE76_001919, gene-QYE76_002696, gene-QYE76_003537, gene-QYE76_007507, gene-QYE76_009138, gene-QYE76_009778, gene-QYE76_010008, gene-QYE76_012782, gene-QYE76_013864, gene-QYE76_015782, gene-QYE76_016559, gene-QYE76_020414, gene-QYE76_026322, gene-QYE76_037668, gene-QYE76_039106, gene-QYE76_039799, gene-QYE76_045804, gene-QYE76_047286, gene-QYE76_048239, gene-QYE76_054888, gene-QYE76_055100, gene-QYE76_056282, gene-QYE76_060209, gene-QYE76_061182, gene-QYE76_062624, gene-QYE76_064958, gene-QYE76_066588