Basic Information
Locus ID:
gene-QYE76_001258
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 35394112 | 35394675 | + | gene-QYE76_001258 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.59 | 18,880.19 Da | 18.90 | 73.58 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00314 | Thaumatin family | 32 | 153 | 4.4E-29 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 25 | 186 | 6.02E-41 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 26 | 185 | 2.8E-43 | IPR037176 |
| SMART | SM00205 | tha2 | 28 | 185 | 1.4E-17 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 164 | 3.7E-40 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 150 | 187 | 0.32 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 25 | 185 | 25.855095 | IPR001938 |
| ProSitePatterns | PS00316 | Thaumatin family signature. | 85 | 100 | - | IPR017949 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 123 | 139 | 3.0E-29 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 50 | 59 | 3.0E-29 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 27 | 39 | 3.0E-29 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 175 | 184 | 3.0E-29 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 85 | 114 | 3.0E-29 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77700.2 | - | 0 |
| RefSeq | XP_047047752.1 | thaumatin-like protein [Lolium rigidum] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6X8C7 | Thaumatin-like protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology