Basic Information
Locus ID:
gene-QYE76_001210
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Transposase-associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 33747704 | 33756410 | + | gene-QYE76_001210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 135,309.73 Da | 60.62 | 60.42 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02992 | Transposase family tnp2 | 336 | 375 | 8.9E-12 | IPR004242 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 482 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 532 | 580 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 782 | 807 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1176 | 1201 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 532 | 586 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 784 | 799 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 150 | - | - |
| Coils | Coil | Coil | 524 | 554 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051211866.1 | uncharacterized protein LOC127329379 [Lolium perenne] | 0 |
| TrEMBL | A0A8J5TKY2 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0014g46908 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 30 | gene-QYE76_001210, gene-QYE76_002996, gene-QYE76_004554 ... |