Basic Information
Locus ID:
gene-QYE76_001021
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 26697526 | 26700606 | + | gene-QYE76_001021 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 70,188.08 Da | 48.03 | 95.16 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 20 | 126 | 3.46096E-46 | - |
| Pfam | PF00651 | BTB/POZ domain | 28 | 114 | 1.6E-9 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 212 | 472 | 1.3E-91 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 16 | 114 | 1.41E-18 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 16 | 133 | 2.4E-14 | IPR011333 |
| SMART | SM00225 | BTB_4 | 29 | 127 | 1.7E-5 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 97 | 12.660429 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 212 | 496 | 90.18589 | IPR027356 |
| Coils | Coil | Coil | 544 | 571 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_051184456.1 | BTB/POZ domain-containing protein At1g30440-like [Lolium perenne] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8I6XK11 | NPH3 domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology