Basic Information
Locus ID:
gene-QYE76_000735
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 17862915 | 17863486 | - | gene-QYE76_000735 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.20 | 17,620.97 Da | 63.53 | 83.92 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 87 | 142 | 7.36843E-13 | - |
| Pfam | PF00240 | Ubiquitin family | 86 | 142 | 2.9E-12 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 52 | 146 | 6.91E-16 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 41 | 143 | 5.7E-14 | - |
| SMART | SM00213 | ubq_7 | 74 | 145 | 3.1E-9 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 72 | 142 | 13.075337 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 126 | 147 | 6.9E-6 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 83 | 103 | 6.9E-6 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 37 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09790.1 | ubiquitin 8. encodes a ubiquitin-like protein that contains tandem repeats of the ubiquitin coding region, but at least one repeat per gene encodes a protein with amino acid substitutions. | 0 |
| RefSeq | XP_051189899.1 | polyubiquitin 8-like [Lolium perenne] | 0 |
| P49633 | Ubiquitin-ribosomal protein eL40 fusion protein OS=Acanthamoeba castellanii OX=5755 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453QPD3 | Ubiquitin-like domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_000728, gene-QYE76_000732, gene-QYE76_000733 ... |