Basic Information
Locus ID:
gene-QYE76_000733
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 17834567 | 17834994 | - | gene-QYE76_000733 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 12,817.63 Da | 52.66 | 81.88 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 33 | 85 | 2.8E-11 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 6 | 85 | 2.21E-14 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 14 | 94 | 4.0E-13 | - |
| SMART | SM00213 | ubq_7 | 21 | 98 | 7.0E-8 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 19 | 84 | 11.507508 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051189899.1 | polyubiquitin 8-like [Lolium perenne] | 0 |
| P49633 | Ubiquitin-ribosomal protein eL40 fusion protein OS=Acanthamoeba castellanii OX=5755 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3G5ACX6 | Ubiquitin-domain-containing protein OS=Satyrvirus sp. OX=2487771 GN=Satyrvirus2_67 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_000728, gene-QYE76_000732, gene-QYE76_000733 ... |