Basic Information
Locus ID:
gene-QYE76_000728
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 17692281 | 17693529 | - | gene-QYE76_000728 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.74 | 14,957.29 Da | 61.76 | 94.55 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 63 | 118 | 1.07812E-12 | - |
| Pfam | PF00240 | Ubiquitin family | 62 | 118 | 2.0E-12 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 34 | 122 | 2.76E-16 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 43 | 119 | 3.9E-14 | - |
| SMART | SM00213 | ubq_7 | 50 | 121 | 3.1E-9 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 48 | 118 | 13.075337 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 102 | 123 | 5.5E-6 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 59 | 79 | 5.5E-6 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09790.1 | ubiquitin 8. encodes a ubiquitin-like protein that contains tandem repeats of the ubiquitin coding region, but at least one repeat per gene encodes a protein with amino acid substitutions. | 0 |
| RefSeq | XP_051189899.1 | polyubiquitin 8-like [Lolium perenne] | 0 |
| P49633 | Ubiquitin-ribosomal protein eL40 fusion protein OS=Acanthamoeba castellanii OX=5755 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3G5ACX6 | Ubiquitin-domain-containing protein OS=Satyrvirus sp. OX=2487771 GN=Satyrvirus2_67 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_000728, gene-QYE76_000732, gene-QYE76_000733 ... |