HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QYE76_000689
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 16342773 16343969 + gene-QYE76_000689
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.54 43,097.33 Da 58.00 95.91 0.12
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 12 53 5.4E-7 IPR001810
SUPERFAMILY SSF81383 F-box domain 11 63 6.93E-10 IPR036047
Gene3D G3DSA:1.20.1280.50 - 11 49 9.7E-7 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_047052314.1 uncharacterized protein LOC124657880 [Lolium rigidum] 0
TrEMBL A0A3B6MTI3 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 2 AH02.1467, BH02.1539
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_5AG0372460, gene-QOZ80_5BG0419840
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.5HG0488740.1.CDS1
Poaceae Lolium multiflorum 2 gene-QYE76_000689, gene-QYE76_000691
Poaceae Paspalum vaginatum 1 gene-BS78_04G285400
Poaceae Puccinellia tenuiflora 1 Pt_Chr0704298
Poaceae Thinopyrum elongatum 1 Tel5E01G404200
Poaceae Triticum dicoccoides 2 gene_TRIDC5AG039370, gene_TRIDC5BG041810
Poaceae Triticum aestivum 3 TraesCS5A02G252500.1.cds1, TraesCS5B02G251200.1.cds1 ...
TraesCS5D02G260100.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.