Basic Information
Locus ID:
gene-QYE76_000491
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 11247303 | 11248404 | - | gene-QYE76_000491 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 28,822.40 Da | 45.99 | 78.79 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 16 | 147 | 1.22249E-17 | IPR002083 |
| Pfam | PF13456 | Reverse transcriptase-like | 161 | 211 | 6.9E-6 | IPR002156 |
| Pfam | PF00651 | BTB/POZ domain | 213 | 253 | 2.6E-9 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 13 | 152 | 8.34E-25 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 203 | 258 | 5.76E-12 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 187 | 261 | 9.6E-14 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 15 | 152 | 3.2E-20 | IPR008974 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 221 | 265 | 11.626329 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 15 | 147 | 14.714513 | IPR002083 |
Gene Ontology
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.2 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_047050482.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium rigidum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | I1GM66 | BTB domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100836197 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | AH05.1237, AH06.2058, AH08.728, AH08.759, BH08.738 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_000485, gene-QYE76_000491 |
| Poaceae | Thinopyrum elongatum | 2 | Tel4E01G606100, Tel7E01G877400 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-51292 |