halophFGD

Basic Information

Locus ID: gene-QYE76_000485

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: Speckle-type POZ protein-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr5	11065164	11065583	+	gene-QYE76_000485

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.86	15,441.50 Da	47.07	78.56	0.06

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	16	133	2.77185E-12	IPR002083
SUPERFAMILY	SSF49599	TRAF domain-like	16	133	1.06E-18	-
Gene3D	G3DSA:2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	16	137	1.8E-14	IPR008974
ProSiteProfiles	PS50144	MATH/TRAF domain profile.	15	139	8.807959	IPR002083

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G06190.2	BTB-POZ and MATH domain 2.
RefSeq	XP_047050482.1	BTB/POZ and MATH domain-containing protein 2-like [Lolium rigidum]
Swiss-Prot	Q9M8J9	BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1
TrEMBL	I1GM66	BTB domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100836197 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	6	AH05.1237, AH06.2058, AH08.728, AH08.759, BH08.738 ... CH09.2792
Poaceae	Lolium multiflorum	2	gene-QYE76_000485, gene-QYE76_000491
Poaceae	Thinopyrum elongatum	2	Tel4E01G606100, Tel7E01G877400
Poaceae	Zoysia japonica	1	nbis-gene-51292