Basic Information
Locus ID:
gene-QYE76_000430
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 9219480 | 9219827 | + | gene-QYE76_000430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 12,632.44 Da | 29.73 | 90.78 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 24 | 82 | 3.9E-17 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 6 | 82 | 3.91E-20 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 5 | 110 | 2.9E-23 | - |
| SMART | SM00213 | ubq_7 | 12 | 85 | 8.3E-13 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 12 | 82 | 18.453861 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 23 | 43 | 5.9E-17 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 65 | 86 | 5.9E-17 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 44 | 64 | 5.9E-17 | IPR019956 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36170.1 | Ubiquitin supergroup;Ribosomal protein L40e. | 0 |
| RefSeq | XP_002953759.1 | component of cytosolic 80S ribosome and 60S large subunit, partial [Volvox carteri f. nagariensis] | 0 |
| P33190 | Ubiquitin-ribosomal protein eL40 fusion protein OS=Tetrahymena pyriformis OX=5908 GN=TUF11 PE=3 SV=2 | 0 | |
| TrEMBL | A0A7S2Z4G9 | Ubiquitin-like domain-containing protein OS=Chloropicon laureae OX=464258 GN=CLAU1311_LOCUS5569 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_000262, gene-QYE76_000265, gene-QYE76_000430 ... |