halophFGD

Basic Information

Locus ID: gene-QYE76_000265

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: Ribosomal protein S27a

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr5	4583563	4583823	-	gene-QYE76_000265

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.28	9,447.77 Da	14.31	97.67	-0.14

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00240	Ubiquitin family	23	86	6.5E-17	IPR000626
SUPERFAMILY	SSF54236	Ubiquitin-like	12	86	5.76E-19	IPR029071
Gene3D	G3DSA:3.10.20.90	-	4	86	8.8E-23	-
SMART	SM00213	ubq_7	12	84	3.7E-12	IPR000626
ProSiteProfiles	PS50053	Ubiquitin domain profile.	12	86	19.107122	IPR000626
PRINTS	PR00348	Ubiquitin signature	65	86	1.1E-18	IPR019956
PRINTS	PR00348	Ubiquitin signature	44	64	1.1E-18	IPR019956
PRINTS	PR00348	Ubiquitin signature	23	43	1.1E-18	IPR019956

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT2G36170.1	Ubiquitin supergroup;Ribosomal protein L40e.	0
RefSeq	XP_010046715.2	ubiquitin [Eucalyptus grandis]	0
Swiss-Prot	P33190	Ubiquitin-ribosomal protein eL40 fusion protein OS=Tetrahymena pyriformis OX=5908 GN=TUF11 PE=3 SV=2	0
TrEMBL	A0A7S2Z4G9	Ubiquitin-like domain-containing protein OS=Chloropicon laureae OX=464258 GN=CLAU1311_LOCUS5569 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	4	gene-QYE76_000262, gene-QYE76_000265, gene-QYE76_000430 ... gene-QYE76_000438