Basic Information
Locus ID:
gene-QYE76_000262
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ribosomal protein S27a
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 4548156 | 4548383 | - | gene-QYE76_000262 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.35 | 8,258.29 Da | 30.32 | 91.07 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 23 | 75 | 1.3E-11 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 7 | 75 | 1.04E-12 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 17 | 75 | 2.2E-16 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 11 | 75 | 13.467295 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 43 | 63 | 3.4E-13 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 22 | 42 | 3.4E-13 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 64 | 75 | 3.4E-13 | IPR019956 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36170.1 | Ubiquitin supergroup;Ribosomal protein L40e. | 0 |
| RefSeq | XP_002953759.1 | component of cytosolic 80S ribosome and 60S large subunit, partial [Volvox carteri f. nagariensis] | 0 |
| P69200 | Ubiquitin-ribosomal protein eL40 fusion protein OS=Leishmania tarentolae OX=5689 GN=UB-EP52 PE=3 SV=2 | 0 | |
| TrEMBL | G2WS31 | Ubiquitin OS=Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137) OX=498257 GN=VDAG_00364 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_000262, gene-QYE76_000265, gene-QYE76_000430 ... |