Basic Information
Locus ID:
gene-QYE76_000240
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 3911106 | 3918973 | - | gene-QYE76_000240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 171,782.81 Da | 40.36 | 92.86 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14798 | RX-CC_like | 478 | 599 | 2.01562E-14 | IPR038005 |
| Pfam | PF00931 | NB-ARC domain | 654 | 879 | 5.3E-38 | IPR002182 |
| Pfam | PF00069 | Protein kinase domain | 35 | 254 | 2.0E-46 | IPR000719 |
| Pfam | PF18052 | Rx N-terminal domain | 479 | 558 | 1.3E-9 | IPR041118 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 265 | 363 | 5.1E-11 | IPR000535 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 20 | 252 | 1.8E-59 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 959 | 1380 | 8.84E-24 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 619 | 892 | 6.25E-59 | IPR027417 |
| SUPERFAMILY | SSF49354 | PapD-like | 250 | 386 | 1.44E-11 | IPR008962 |
| Gene3D | G3DSA:1.10.10.10 | - | 879 | 972 | 7.4E-11 | IPR036388 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 262 | 379 | 3.2E-18 | IPR013783 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 13 | 104 | 1.7E-19 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 612 | 785 | 3.2E-31 | IPR027417 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 126 | 261 | 3.9E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1007 | 1395 | 1.2E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 791 | 878 | 5.0E-13 | IPR042197 |
| Gene3D | G3DSA:1.20.5.4130 | - | 478 | 611 | 7.1E-15 | - |
| SMART | SM00220 | serkin_6 | 32 | 319 | 1.5E-25 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 262 | 379 | 15.717758 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 32 | 303 | 33.841755 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 38 | 60 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 166 | 178 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 659 | 674 | 1.3E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 829 | 843 | 1.3E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1081 | 1097 | 1.3E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 730 | 744 | 1.3E-15 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1431 | 1452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1431 | 1506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 437 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46730.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_051184857.1 | disease resistance protein RGA5-like isoform X4 [Lolium perenne] | 0 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6I7P7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_000240 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G117800 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0601224 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G885000 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC3BG085690, gene_TRIDC3BG085710 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS3B02G593500.1, TraesCS3B02G611100.1 ... |