Basic Information
Locus ID:
gene-QYE76_000179
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
zinc-RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 1719998 | 1721760 | - | gene-QYE76_000179 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.11 | 30,708.36 Da | 54.21 | 64.46 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16745 | RING-HC_AtRMA_like | 71 | 115 | 1.12633E-29 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 72 | 118 | 1.8E-8 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 68 | 126 | 2.5E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 44 | 128 | 1.4E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 73 | 113 | 2.4E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 73 | 114 | 13.344952 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 88 | 97 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 159 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19310.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_047047455.1 | E3 ubiquitin-protein ligase RNF5-like [Lolium rigidum] | 0 |
| Q99942 | E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1 | 0 | |
| TrEMBL | F2CU97 | RING-type E3 ubiquitin transferase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology