halophFGD

Basic Information

Locus ID: gene-QOZ80_UnG0722890

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: BTB/POZ domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
scaffold_20	906393	907109	+	gene-QOZ80_UnG0722890

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.30	26,901.49 Da	60.74	82.31	-0.38

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	2	114	2.64143E-12	IPR002083
Pfam	PF00651	BTB/POZ domain	147	204	2.8E-11	IPR000210
SUPERFAMILY	SSF49599	TRAF domain-like	3	119	3.92E-17	-
SUPERFAMILY	SSF54695	POZ domain	139	205	2.15E-16	IPR011333
Gene3D	G3DSA:2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	1	117	6.5E-16	IPR008974
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	123	216	5.6E-18	IPR011333
ProSiteProfiles	PS50097	BTB domain profile.	156	204	11.605647	IPR000210
ProSiteProfiles	PS50144	MATH/TRAF domain profile.	1	113	11.876298	IPR002083

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G19000.1	BTB-POZ and MATH domain 1.
RefSeq	XP_002461901.1	BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor]
Swiss-Prot	Q8L765	BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1
TrEMBL	A0A5J9VV42	BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_12909 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene-QOZ80_UnG0722890.