Basic Information
Locus ID:
gene-QOZ80_9BG0717320
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 60154251 | 60155462 | - | gene-QOZ80_9BG0717320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.15 | 42,053.37 Da | 50.88 | 110.00 | 0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 129 | 187 | 1.4E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 200 | 218 | 1.8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 4.9E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 69 | 359 | 6.26E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 200 | 371 | 9.5E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 199 | 6.5E-31 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 128 | 151 | 4.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 97.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 174 | 198 | 31.0 | IPR003591 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 153 | 166 | 9.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 174 | 187 | 9.2E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_039777840.1 | leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 [Panicum virgatum] | 0 |
| TrEMBL | A0A5J9UJA8 | LRRNT_2 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_26253 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology