Basic Information
Locus ID:
gene-QOZ80_9BG0717200
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 60060530 | 60062206 | + | gene-QOZ80_9BG0717200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 63,565.80 Da | 48.24 | 89.64 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 6 | 42 | 1.9E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 133 | 408 | 3.34E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 6 | 47 | 1.44E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 46 | 1.7E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 102 | 506 | 9.7E-12 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 4 | 40 | 9.603447 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56810.2 | - | 0 |
| RefSeq | XP_052137099.1 | LOW QUALITY PROTEIN: putative F-box/LRR-repeat protein At1g56400 [Oryza glaberrima] | 0 |
| TrEMBL | A0A5J9UKX6 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_26305 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology