Basic Information
Locus ID:
gene-QOZ80_9BG0716520
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 59373986 | 59377834 | + | gene-QOZ80_9BG0716520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 67,938.11 Da | 43.15 | 102.25 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 59 | 2.9E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 111 | 170 | 8.3E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 283 | 558 | 3.7E-43 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 184 | 4.25E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 258 | 559 | 4.78E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 201 | 8.2E-51 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 249 | 358 | 1.1E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 359 | 578 | 1.8E-60 | - |
| SMART | SM00220 | serkin_6 | 280 | 563 | 3.5E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 280 | 563 | 35.19862 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 135 | 158 | 7.21141 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 405 | 417 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 286 | 310 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10290.1 | leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_039824409.1 | LRR receptor kinase SERK2-like isoform X2 [Panicum virgatum] | 0 |
| Q6K4T4 | LRR receptor kinase SERK2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERK4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9UL98 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_26757 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH04.1914, BH04.1940, CH04.2286 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0688640, gene-QOZ80_9BG0716520 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0656900.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_066033 |
| Poaceae | Oryza coarctata | 2 | Oco21G008360, Oco22G009610 |
| Poaceae | Oryza sativa | 1 | LOC_Os11g39370.1 |
| Poaceae | Paspalum vaginatum | 5 | gene-BS78_05G204100, gene-BS78_05G204800, gene-BS78_K079100 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0107637 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr16G004840, Chr17G004310, Chr31G007680 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G266000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG016000, gene_TRIDC7BG005350 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G134700.2, TraesCS7B02G036100.2 ... |
| Poaceae | Zea mays | 1 | Zm00001eb167150_P002 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18174 |