Basic Information
Locus ID:
gene-QOZ80_9BG0715300
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 57505619 | 57507301 | + | gene-QOZ80_9BG0715300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.59 | 62,232.46 Da | 48.15 | 93.34 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 5 | 41 | 3.7E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 45 | 5.36E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 150 | 404 | 2.88E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 151 | 533 | 1.1E-5 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 42 | 3.7E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 2 | 38 | 9.576953 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14103.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_010239038.1 | F-box protein At3g03040 [Brachypodium distachyon] | 0 |
| Q8L7H1 | F-box/LRR-repeat protein At4g14103 OS=Arabidopsis thaliana OX=3702 GN=At4g14103 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0SZ27 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5KG588400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology