Basic Information
Locus ID:
gene-QOZ80_9BG0714850
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
PF15
Description:
microtubule severing
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 56647964 | 56650756 | + | gene-QOZ80_9BG0714850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.81 | 22,666.35 Da | 25.95 | 91.22 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 74 | 112 | 3.0E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 120 | 153 | 0.0093 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 1 | 186 | 1.57E-33 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 197 | 4.8E-42 | IPR015943 |
| SMART | SM00320 | WD40_4 | 29 | 68 | 0.23 | IPR001680 |
| SMART | SM00320 | WD40_4 | 71 | 112 | 4.7E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 115 | 154 | 0.028 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 78 | 114 | 10.732868 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 78 | 121 | 13.68318 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 99 | 113 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79990.2 | structural molecules. | 0 |
| RefSeq | XP_045087077.1 | coatomer subunit beta'-2 isoform X2 [Aegilops tauschii subsp. strangulata] | 0 |
| Q9CAA0 | Coatomer subunit beta'-1 OS=Arabidopsis thaliana OX=3702 GN=At1g79990 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453T9V3 | WD_REPEATS_REGION domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology