Basic Information
Locus ID:
gene-QOZ80_9BG0714650
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 56387338 | 56388327 | + | gene-QOZ80_9BG0714650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 37,056.61 Da | 41.35 | 77.63 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 15 | 145 | 5.7109E-22 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 167 | 265 | 2.7E-15 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 12 | 153 | 5.4E-30 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 158 | 289 | 4.51E-20 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 13 | 149 | 7.8E-26 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 150 | 294 | 3.9E-33 | IPR011333 |
| SMART | SM00225 | BTB_4 | 172 | 269 | 9.7E-15 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 14 | 144 | 17.706144 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 172 | 245 | 16.010914 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_039822900.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum virgatum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9V7E3 | Speckle-type POZ protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_23128 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene-QOZ80_9BG0714650.