Basic Information
Locus ID:
gene-QOZ80_9BG0714630
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 56379963 | 56380934 | + | gene-QOZ80_9BG0714630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 35,326.57 Da | 28.27 | 82.72 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 27 | 156 | 1.33839E-17 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 197 | 300 | 2.7E-19 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 197 | 302 | 2.75E-19 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 23 | 163 | 6.38E-28 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 175 | 323 | 7.3E-29 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 27 | 161 | 1.5E-21 | IPR008974 |
| SMART | SM00225 | BTB_4 | 198 | 303 | 4.2E-14 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 26 | 156 | 14.075275 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 198 | 268 | 15.287044 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_004980769.1 | BTB/POZ and MATH domain-containing protein 2 [Setaria italica] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9ULJ2 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_26581 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_9AG0689800, gene-QOZ80_9AG0689810 ... |