Basic Information
Locus ID:
gene-QOZ80_9BG0714580
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 56345179 | 56352458 | + | gene-QOZ80_9BG0714580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 83,348.14 Da | 31.80 | 93.62 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 16 | 61 | 5.83193E-10 | IPR002083 |
| CDD | cd00121 | MATH | 415 | 542 | 1.25834E-19 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 232 | 344 | 1.16139E-46 | - |
| CDD | cd18280 | BTB_POZ_BPM_plant | 569 | 674 | 9.04729E-47 | - |
| Pfam | PF00651 | BTB/POZ domain | 242 | 346 | 7.1E-22 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 574 | 680 | 3.5E-25 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 64 | 136 | 1.9E-10 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 64 | 136 | 1.45E-11 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 13 | 62 | 7.03E-13 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 225 | 347 | 1.88E-29 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 562 | 679 | 1.51E-31 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 412 | 545 | 4.25E-28 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 556 | 677 | 4.0E-36 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 212 | 370 | 1.1E-41 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 51 | 135 | 7.4E-14 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 682 | 751 | 1.2E-16 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 413 | 545 | 6.9E-22 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 137 | 206 | 2.5E-19 | - |
| SMART | SM00225 | BTB_4 | 246 | 347 | 1.2E-22 | IPR000210 |
| SMART | SM00225 | BTB_4 | 37 | 138 | 0.0069 | IPR000210 |
| SMART | SM00225 | BTB_4 | 580 | 682 | 1.0E-24 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 246 | 307 | 16.920921 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 14 | 61 | 8.910236 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 412 | 541 | 15.35375 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 580 | 647 | 18.451389 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_025876425.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC4348685 [Oryza sativa Japonica Group] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9ULJ2 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_26581 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_9AG0689720, gene-QOZ80_9BG0714580 ... |