Basic Information
Locus ID:
gene-QOZ80_9BG0714560
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 56338357 | 56339412 | + | gene-QOZ80_9BG0714560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.21 | 38,936.57 Da | 49.34 | 91.71 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 171 | 285 | 2.31143E-45 | - |
| CDD | cd00121 | MATH | 20 | 145 | 3.77662E-16 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 177 | 286 | 7.9E-23 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 166 | 288 | 1.0E-28 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 16 | 150 | 3.43E-24 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 18 | 149 | 3.8E-21 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 161 | 283 | 2.4E-32 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 287 | 351 | 4.1E-16 | - |
| SMART | SM00225 | BTB_4 | 185 | 288 | 2.6E-21 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 17 | 144 | 13.129204 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 185 | 253 | 16.507282 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_004980760.1 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A368S9I4 | BTB domain-containing protein (Fragment) OS=Setaria italica OX=4555 GN=SETIT_8G196600v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_9AG0689680, gene-QOZ80_9BG0714550 ... |