Basic Information
Locus ID:
gene-QOZ80_9BG0714550
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 56336313 | 56337454 | + | gene-QOZ80_9BG0714550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 39,632.77 Da | 42.84 | 87.93 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 20 | 147 | 2.00487E-16 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 179 | 288 | 2.7E-22 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 19 | 151 | 2.94E-23 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 167 | 288 | 3.14E-28 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 17 | 151 | 1.7E-19 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 162 | 285 | 7.2E-32 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 290 | 353 | 2.5E-17 | - |
| SMART | SM00225 | BTB_4 | 186 | 290 | 2.5E-21 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 18 | 146 | 10.904657 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 186 | 253 | 16.527964 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_047083775.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium rigidum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T8IA07 | BTB domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_8G233900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_9AG0689680, gene-QOZ80_9BG0714550 ... |