Basic Information
Locus ID:
gene-QOZ80_9BG0714540
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 56330024 | 56333502 | + | gene-QOZ80_9BG0714540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 59,224.26 Da | 37.59 | 82.71 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 247 | 377 | 4.61572E-21 | IPR002083 |
| CDD | cd00121 | MATH | 27 | 174 | 5.61068E-22 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 402 | 516 | 6.62188E-49 | - |
| Pfam | PF00651 | BTB/POZ domain | 409 | 517 | 1.9E-22 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 398 | 517 | 1.14E-29 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 26 | 183 | 1.32E-27 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 244 | 380 | 5.23E-25 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 26 | 179 | 3.9E-25 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 382 | 539 | 2.4E-44 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 245 | 380 | 8.4E-24 | IPR008974 |
| SMART | SM00225 | BTB_4 | 416 | 519 | 1.4E-19 | IPR000210 |
| SMART | SM00061 | math_3 | 251 | 359 | 8.7E-4 | IPR002083 |
| SMART | SM00061 | math_3 | 31 | 139 | 4.2E-11 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 246 | 376 | 16.785643 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 416 | 483 | 16.838194 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 26 | 174 | 15.660584 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_051229717.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium perenne] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5UMM9 | BTB/POZ and MATH domain-containing protein 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0024865 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0689670, gene-QOZ80_9BG0714540 |