Basic Information
Locus ID:
gene-QOZ80_9BG0712650
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 53325696 | 53329646 | - | gene-QOZ80_9BG0712650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 77,003.61 Da | 45.05 | 82.09 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 367 | 495 | 1.68177E-9 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 551 | 632 | 8.6E-7 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 157 | 260 | 4.8E-23 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 549 | 631 | 5.69E-8 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 149 | 264 | 3.34E-27 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 364 | 500 | 8.99E-12 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 524 | 634 | 8.2E-10 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 635 | 695 | 3.7E-9 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 135 | 302 | 2.5E-36 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 363 | 509 | 7.4E-7 | IPR008974 |
| SMART | SM00225 | BTB_4 | 166 | 271 | 4.7E-22 | IPR000210 |
| SMART | SM00225 | BTB_4 | 503 | 633 | 0.24 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 166 | 233 | 20.002539 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 111 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_004964239.1 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W8S5 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_04585 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9BG0712650 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0219660.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 12 | gene-QYE76_000351, gene-QYE76_018036, gene-QYE76_020460 ... |
| Poaceae | Puccinellia tenuiflora | 8 | Pt_Chr0100491, Pt_Chr0106602, Pt_Chr0206622, Pt_Chr0206755 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G840100 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC3AG009110, gene_TRIDC3AG071980 ... |
| Poaceae | Triticum aestivum | 11 | TraesCS3A02G009700.1.cds1, TraesCS3A02G076600.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb418740_P001 |