Basic Information
Locus ID:
gene-QOZ80_9BG0710870
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 50113426 | 50125967 | + | gene-QOZ80_9BG0710870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 130,484.30 Da | 44.07 | 81.30 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02659 | peptidase_C19C | 205 | 533 | 2.92534E-166 | - |
| CDD | cd00121 | MATH | 65 | 180 | 1.98273E-33 | IPR002083 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 207 | 528 | 6.0E-47 | IPR001394 |
| Pfam | PF00917 | MATH domain | 70 | 189 | 1.1E-18 | IPR002083 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 632 | 881 | 1.8E-72 | IPR024729 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 891 | 1100 | 1.0E-54 | IPR029346 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 64 | 195 | 5.72E-39 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 202 | 558 | 2.75E-97 | IPR038765 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 61 | 203 | 8.1E-51 | IPR008974 |
| Gene3D | G3DSA:3.10.20.90 | - | 807 | 904 | 3.2E-27 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 692 | 806 | 1.3E-39 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 204 | 532 | 5.7E-90 | - |
| SMART | SM00061 | math_3 | 65 | 168 | 5.9E-15 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 63 | 187 | 36.2696 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 207 | 531 | 40.561043 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 447 | 464 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 208 | 223 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 61 | - | - |
| Coils | Coil | Coil | 547 | 567 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.1 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_034607285.1 | ubiquitin carboxyl-terminal hydrolase 12-like isoform X2 [Setaria viridis] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9UMG0 | ubiquitinyl hydrolase 1 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_27399 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology