HalophFGD

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Basic Information
Locus ID: gene-QOZ80_9BG0709650
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: Protein of unknown function (DUF295)
Maps and Mapping Data
Chromosome Start End Strand ID
chr9B 47533744 47536560 + gene-QOZ80_9BG0709650
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.85 35,523.03 Da 44.43 88.01 -0.03
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 8 44 4.6E-4 IPR001810
SUPERFAMILY SSF81383 F-box domain 3 44 1.83E-8 IPR036047
Gene3D G3DSA:1.20.1280.50 - 8 46 6.8E-9 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_003575911.1 F-box protein SKIP23 [Brachypodium distachyon] 0
TrEMBL A0A1E5UTN9 DUF295 domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0022814 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Arecaceae Cocos nucifera 6 COCNU_09G005540, COCNU_09G005550, COCNU_09G005560 ...
COCNU_09G005570, COCNU_09G005580, COCNU_09G005590
Arecaceae Phoenix dactylifera 2 gene-LOC103723999, gene-LOC103724000
Nitrariaceae Nitraria sibirica 1 evm.TU.LG11.375
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_9BG0709650
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.