HalophFGD

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Basic Information
Locus ID: gene-QOZ80_9BG0708810
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr9B 45630187 45631293 + gene-QOZ80_9BG0708810
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.01 42,240.67 Da 62.01 61.25 -0.60
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 209 235 - -
MobiDBLite mobidb-lite consensus disorder prediction 341 368 - -
MobiDBLite mobidb-lite consensus disorder prediction 205 252 - -
Coils Coil Coil 267 287 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021319920.1 uncharacterized protein LOC8086053 [Sorghum bicolor] 0
TrEMBL A0A3L6QPX6 Putative copia-like retroelement OS=Panicum miliaceum OX=4540 GN=C2845_PM04G17000 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 11 AH03.1681, BH02.1694, BH03.321, BH04.871, BH07.2625 ...
BH07.530, BH08.2454, CH01.3764, CH06.1786, CH07.1931, CH07.673
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_3AG0221350, gene-QOZ80_3BG0267940 ...
gene-QOZ80_5BG0436290, gene-QOZ80_7AG0559940, gene-QOZ80_7AG0575730, gene-QOZ80_8AG0621170, gene-QOZ80_9BG0708810
Poaceae Oryza coarctata 4 Oco03G007240, Oco10G013850, Oco11G010490, Oco19G003500
Poaceae Paspalum vaginatum 6 gene-BS78_06G044000, gene-BS78_08G060500, gene-BS78_K024200 ...
gene-BS78_09G090900, gene-BS78_K178800, gene-BS78_K235300
Poaceae Sporobolus alterniflorus 9 Chr01G030640, Chr01G034250, Chr03G009660, Chr05G004500 ...
Chr05G022340, Chr07G021010, Chr23G013710, Chr25G008800, Chr31G003540
Poaceae Zea mays 1 Zm00001eb384270_P001
Poaceae Zoysia japonica 11 nbis-gene-1295, nbis-gene-27399, nbis-gene-33913 ...
nbis-gene-36081, nbis-gene-36092, nbis-gene-42451, nbis-gene-42484, nbis-gene-43865, nbis-gene-48931, nbis-gene-54850, nbis-gene-54938
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.