Basic Information
Locus ID:
gene-QOZ80_9BG0703550
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9B | 20037396 | 20038520 | + | gene-QOZ80_9BG0703550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 40,447.23 Da | 35.13 | 63.96 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 127 | 168 | 1.4E-4 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 170 | 216 | 6.6E-13 | IPR006652 |
| Pfam | PF00646 | F-box domain | 20 | 52 | 3.5E-7 | IPR001810 |
| SUPERFAMILY | SSF117281 | Kelch motif | 95 | 361 | 7.45E-46 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 15 | 58 | 9.03E-9 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 59 | 296 | 3.1E-39 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 297 | 372 | 4.2E-6 | IPR015915 |
| SMART | SM00612 | kelc_smart | 133 | 181 | 2.7E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 232 | 281 | 8.7 | IPR006652 |
| SMART | SM00612 | kelc_smart | 182 | 231 | 7.2E-7 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_004978976.1 | F-box/kelch-repeat protein At2g44130 [Setaria italica] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A835ETA8 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_029406 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology